Insertion junction: CLIP2.042284_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042284
Chromosome:chromosome 14
Location:1042985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614151 (1 of 1) PF13831//PF13832 - PHD-finger (PHD_2) // PHD-zinc-finger like domain (zf-HC5HC2H_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACCCGCGCCGTCATGAGCCAGCGCGCTGCGGAGGAGCTGAACAAGAG
Internal bar code:GGCGTGGCCGTGGCGAAACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2481
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCATCTGAGCATCCTCT
Suggested primer 2:GCGCATTACCTGTTGCTACG