Insertion junction: CLIP2.042285_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042285
Chromosome:chromosome 4
Location:451096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217920 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACACGGGGGAGGCAGCATCACAGGCCCGCACAAGGTGTTGAGGTTTG
Internal bar code:AGTTACACGAAAAGTGTCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGGTAGCACGTGATTG
Suggested primer 2:TACTGCTGCTTGTGGTCCTG