Insertion junction: CLIP2.042288_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042288
Chromosome:chromosome 2
Location:6996230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389541 OPR9 OctotricoPeptide Repeat protein 9; (1 of 1) IPR000104//IPR011237//IPR011335//IPR013584 - Antifreeze protein, type I // Peptidase M16 domain // Restriction endonuclease type II-like // RAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTTCCCCTCACCAGTGTGCTCATTCCCCACAGGGCCGCCACCAAGCA
Internal bar code:ACTGATCTAGGTTAGTGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2570
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GACGATGCGGAGTTTGATGC
Suggested primer 2:AGCAGGACACTTCACTGTCG