Insertion junction: CLIP2.042303_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042303
Chromosome:chromosome 9
Location:5217074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406950 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAAAAAGCATCTTCATGCGCACGTATCCCACACATGCACACACAGCTA
Internal bar code:GTACTAAGCATGGTGTTGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1333
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTGTGTGTTGTTCTTCC
Suggested primer 2:CTGCTTTGTGGAACGCTCAC