Insertion junction: CLIP2.042305_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042305
Chromosome:chromosome 16
Location:2895936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTCTCGCAAGTGCTCGAGCGGAATGCCATCCTGCGGCAAGCGGACAG
Internal bar code:TTCGCTTGTTTGATACTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4062
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTAGTGGTAGCGTTGGCG
Suggested primer 2:GTTGGAGGCGACAACTGAGA