Insertion junction: CLIP2.042312_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042312
Chromosome:chromosome 3
Location:6864170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197700 HLM8 (1 of 1) PTHR13793//PTHR13793:SF100 - PHD FINGER PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED; Histone-lysine N-methyltransferase CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGTGGGTGGCGGCGGCTTCTCCATGTCAGCTGGCCAGTTGGCGAAG
Internal bar code:CAAAGAGAGCGCCGTGTGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3463
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATTGAGCACGGCCAGAT
Suggested primer 2:CAAGTCGTTGTGGCACTTGG