Insertion junction: CLIP2.042313_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042313
Chromosome:chromosome 7
Location:3571772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800816 (1 of 1) PTHR10073:SF7 - DNA MISMATCH REPAIR PROTEIN MLH3-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGCCAGTCCACCATCTGCCTCATGTCCACGGCAGGCTTCCTCCTAGC
Internal bar code:ATAGTGGGAGCTCACGCTAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTTGTGTTCACGTGCAT
Suggested primer 2:ACGCCTTGTTGCCATACGTA