Insertion junction: CLIP2.042335_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042335
Chromosome:chromosome 17
Location:3599608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725150 (1 of 2) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGTCATACCTTTGCAGGTCGGCGAACGCGGTGTGCAGCTGAGTGGC
Internal bar code:CTTTATTTACTCCCTTCATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATCTGCAGCTTGACCAG
Suggested primer 2:CAGCTGATCGACGTGGACTT