Insertion junction: CLIP2.042339_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042339
Chromosome:chromosome 3
Location:7496836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205550 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACAGCAACCACAACAACAATGACACTAACAACACCGCCACCACCTCC
Internal bar code:ATTAGAAAAGGGATATGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3316
LEAP-Seq percent confirming:98.7952
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAAGAGGGAGGGTTTC
Suggested primer 2:ACCTGCTACTGGATTTGGGC