Insertion junction: CLIP2.042345_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042345
Chromosome:chromosome 12
Location:5655695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531750 GT90-23,GT90F23 (1 of 2) K13667 - protein glucosyltransferase (RUMI, KTELC1); GT90 family protein 23 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGAGATTGGGACACAGGCATTGGGAACGATGCATTGGTCTTACAAGCA
Internal bar code:TCAGGCGCCCTGAGACGAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1118
LEAP-Seq percent confirming:77.3585
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CTATACCACGACGAGCCCAC
Suggested primer 2:ATACCCTGCCCAGCTTTGAC