Insertion junction: CLIP2.042346_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042346
Chromosome:chromosome 7
Location:4206619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342000 (1 of 1) PF00651//PF12847 - BTB/POZ domain (BTB) // Methyltransferase domain (Methyltransf_18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGTTTAGCTTGGACTGGCATCTACAACCCTCCCCCTCACCCTTAATT
Internal bar code:CGCAGTCGTTCCACACAACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:548
LEAP-Seq percent confirming:17.0213
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCGTCTCGTTGAAGTAG
Suggested primer 2:CTCCGCAGCTGTATAGAGGC