Insertion junction: CLIP2.042346_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042346
Chromosome:chromosome 7
Location:4206619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342000 (1 of 1) PF00651//PF12847 - BTB/POZ domain (BTB) // Methyltransferase domain (Methyltransf_18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATGCAAGAGAGCGAGGAGGAGAGCGTTGCCTATGCTTTGGGGGGTA
Internal bar code:CGCAGTCGTTCCACACAACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:131
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGCAGCTGTATAGAGGC
Suggested primer 2:CCCCCGTCTCGTTGAAGTAG