Insertion junction: CLIP2.042349_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042349
Chromosome:chromosome 3
Location:6221630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191500 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCAAAACATCCCGCAAACCGGTAGAAAGAAGGCGATGAGCTCTTCG
Internal bar code:TCTAGTGTCCATGTTATGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACCATCCCACAAAACAC
Suggested primer 2:ATGGAAGAGGGGCGTGAAAG