Insertion junction: CLIP2.042354_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042354
Chromosome:chromosome 16
Location:2698343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661750 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTAGCGGGCGCGGACCTTGCTGCGGGTGCCATCGTCGTTCTTCAGGG
Internal bar code:CCGATAGACACACGCACTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2788
LEAP-Seq percent confirming:72.4138
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTGCCTATCGTATGACA
Suggested primer 2:CATTCACAGTCGCGCTAAGC