Insertion junction: CLIP2.042355_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042355
Chromosome:chromosome 2
Location:1795341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800183 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAGAAAGACCACACGCCATCCAGGAGCCCGTCAGGCACCCCAGCCCC
Internal bar code:GGAGTCTTGTCACCATTCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4319
LEAP-Seq percent confirming:32.8571
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCCTGTTGAGCTGCTGG
Suggested primer 2:CGGGACACCCACGTAAGAAA