Insertion junction: CLIP2.042357_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042357
Chromosome:chromosome 7
Location:3499361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTGTCGCTGGGAAAGGGCGCATGGGACTGCGACGCGAATAAGGAGAT
Internal bar code:GATGTTTTTTGTGACACAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1829
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAATCTCCTCGAACACC
Suggested primer 2:AGGGGCCTATAGGTTGACGT