Insertion junction: CLIP2.042362_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042362
Chromosome:chromosome 9
Location:5980352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412350 (1 of 1) PTHR16557:SF4 - 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACATGAAACGCGCCAGGCGGGATGCGCCCCACGTCCCCCGCCAATGT
Internal bar code:CTCCTTGGGATTTTTGCTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:881
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCAAAGGAACAACACAT
Suggested primer 2:CGTGAGCAAACACAAGCGAA