Insertion junction: CLIP2.042369_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042369
Chromosome:chromosome 13
Location:2640645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581150 NAT30 (1 of 36) PF00583 - Acetyltransferase (GNAT) family (Acetyltransf_1); N-acetyltransferase intron
Cre13.g581200 (1 of 1) PTHR12241//PTHR12241:SF1 - TUBULIN TYROSINE LIGASE-RELATED // TUBULIN--TYROSINE LIGASE PBY1-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCAAAGCCGGGGGGACGCATGGCGCGACGGGGTGCGCGGCCGTGTC
Internal bar code:AGTCAATTCATTCCTTCTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1837
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACACACGCTCCAGAGTC
Suggested primer 2:CGACGCTTGCATGACATCTG