Insertion junction: CLIP2.042369_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042369
Chromosome:chromosome 13
Location:2640646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581150 NAT30 (1 of 36) PF00583 - Acetyltransferase (GNAT) family (Acetyltransf_1); N-acetyltransferase intron
Cre13.g581200 (1 of 1) PTHR12241//PTHR12241:SF1 - TUBULIN TYROSINE LIGASE-RELATED // TUBULIN--TYROSINE LIGASE PBY1-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGCAGAACACACCTCAGCAAATATGAGCGCCACCTCCTTTGTGTCCT
Internal bar code:AGTCAATTCATTCCTTCTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1940
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGCTTGCATGACATCTG
Suggested primer 2:TCAACACACGCTCCAGAGTC