Insertion junction: CLIP2.042373_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042373
Chromosome:chromosome 3
Location:6794585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCGCCCCCTTCCAGCGGCTGGTTCGCGAGGTGTGTCATGGCGCAT
Internal bar code:AGCGTCTTCTAGAAGGTGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4634
LEAP-Seq percent confirming:98.9583
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGGGCGTCCATGTATAT
Suggested primer 2:TCAGGCCCAAACGCAAATTG