Insertion junction: CLIP2.042375_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042375
Chromosome:chromosome 11
Location:496288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467594 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCTGGAAGGGGAGGGCGAGGAGAGGGGACGAGGACGGGAGAGTTGA
Internal bar code:TTTCGTAGATTTGTACACATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACAACAACGCCGTTTGC
Suggested primer 2:GCGGCGTTGTCATTTGACTT