Insertion junction: CLIP2.042380_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042380
Chromosome:chromosome 3
Location:4318084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174400 CDO1 Cysteine dioxygenase, regulated by copper nutrition; (1 of 2) 1.13.11.20 - Cysteine dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGCGCCCGAGCCCGTTGTGCGTGTGCAAGCCCGCTCGACAAAGCGCG
Internal bar code:CTACCTCGAATGGCGCCGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3231
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGAAAGGGAGTCAGCTT
Suggested primer 2:CACGAAGGGGCTCGATAGAC