Insertion junction: CLIP2.042382_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042382
Chromosome:chromosome 3
Location:6393760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192600 THK1 (1 of 1) 2.7.1.21 - Thymidine kinase; Thymidine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTTGGCATGGTAGCTGTGGTGGCGGCGGGCGTCAAGGTGGTGGGTCG
Internal bar code:GGTGTATCAGCTCCGACCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1914
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGGTCTACAAGGCACAC
Suggested primer 2:TACCTAGCAAGCCAGTGTGC