Insertion junction: CLIP2.042385_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042385
Chromosome:chromosome 11
Location:2173760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467736 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGCAGGCGGGCGGACATTAACACACCTCACGCATGTGATGAGTCTTG
Internal bar code:GATATGACAACAGCATGCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:973
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTCACGTCATCTGCGTC
Suggested primer 2:GCGTGTTTCACCAGTTGCAT