Insertion junction: CLIP2.042386_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042386
Chromosome:chromosome 2
Location:4444199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106100 (1 of 1) IPR000104//IPR029058//IPR029059 - Antifreeze protein, type I // Alpha/Beta hydrolase fold // Alpha/beta hydrolase fold-5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGACACACCTGCGGCGTTTGGACAACACGTGCACGTGCCAGTGCGGG
Internal bar code:CGAGTTGACAGAGAGTGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2316
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCATACACTGTCCTACGC
Suggested primer 2:TAGAATGTCAGGGGCCGGTA