Insertion junction: CLIP2.042391_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042391
Chromosome:chromosome 1
Location:3435712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGAACAGGAACGGCCATGACTGTAGGAGGGCAAGGCGAAGAGGTCGG
Internal bar code:ACTTACAGATACTGTCGGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCCTCCTCCTTAGCCT
Suggested primer 2:TGATCCGGAACACCAGGTTG