Insertion junction: CLIP2.042398_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042398
Chromosome:chromosome 3
Location:6678260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195388 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTTGGCAGGACCGACCAGTCGCTGACCCCTGGCACTTTTCGTAATACT
Internal bar code:TGGGCCACAACCAGCGACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3784
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATTTCCAAGAGTGCGGG
Suggested primer 2:AAACCCAACATCAACAGCGC