Insertion junction: CLIP2.042401_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042401
Chromosome:chromosome 16
Location:798876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801882 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGCCGACATGCTTCCCGTGCGGAGTGCAAGCGGGCGCCTCCAAGTC
Internal bar code:TTTGCGATCAGTAGAAAACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2285
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATGCCATTGGGTAGCGT
Suggested primer 2:ACTGACGTCCGACTTGACAC