Insertion junction: CLIP2.042406_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042406
Chromosome:chromosome 12
Location:9312333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGATTAGAGGTCGCGCATAGCCAAGCAATGACAAGCTGTATCATGGTT
Internal bar code:CAACACGTAGGTCAATAGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2092
LEAP-Seq percent confirming:89.2157
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCGGATGAAGGAGAGT
Suggested primer 2:TTGTCGCAACGTTACCGGTA