Insertion junction: CLIP2.042408_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042408
Chromosome:chromosome 1
Location:1710298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009450 DNJ22 DnaJ-like protein; (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGTGGAGCAGACTGCTGCATCGGAGGAAATCAGGGCGGCATACCGG
Internal bar code:TTTATACGATCAATTGTTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCATGTGCGAACAACAA
Suggested primer 2:AGGTTCAGCTGCAGCATGAT