Insertion junction: CLIP2.042410_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042410
Chromosome:chromosome 4
Location:3420127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227600 (1 of 1) PTHR27000:SF77 - LEUCINE-RICH REPEAT PROTEIN KINASE-LIKE PROTEIN 5'UTR
Cre04.g800491 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAACGCTGACGACCCAGATGTTAGAACTGTGCAAATACCCTAGAAATT
Internal bar code:GCGCGCCTCCCGAACAGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2552
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGGCAGTCTCTTCGTGT
Suggested primer 2:TGTAGCCCCTGACAGCATTG