Insertion junction: CLIP2.042411_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042411
Chromosome:chromosome 1
Location:1431683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007600 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTTGAATGGCGAGAGTCGCAATGAGTGGGATGTGAGGCAGAAAGGAG
Internal bar code:GTTAGTAGCCAGAGGATTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1954
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTTACCGTATACGCGT
Suggested primer 2:CTCACACACCCCTCACACTC