Insertion junction: CLIP2.042411_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042411
Chromosome:chromosome 1
Location:1431685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007600 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGTACCAAAACCCATGTCTTTTCCATCCTATCATATCATATGCTCTT
Internal bar code:GCGGTAATGTTCTGGTCAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACACACCCCTCACACTC
Suggested primer 2:CAGGCTTACCGTATACGCGT