Insertion junction: CLIP2.042416_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042416
Chromosome:chromosome 12
Location:7814977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g553900 CNG2 (1 of 1) K04905 - potassium voltage-gated channel Eag-related subfamily H member 2 (KCNH2); Cyclic-nucleotide gated potassium channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATATGGGTGCCACTCGGGGTCAGGTCGTTCGTCGATCGCCCGAGGGG
Internal bar code:GTGCTCAGTCACGCTGATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:67.5
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATCAGCTTGTCGCCCAA
Suggested primer 2:TTCGCTGCCTTCTAGTGCTC