Insertion junction: CLIP2.042420_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042420
Chromosome:chromosome 14
Location:3515945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630750 MAPKKK10 (1 of 8) IPR000719//IPR001245//IPR011009 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain; Mitogen-Activated Protein Kinase Kinase Kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGTGTTGATGCGGCAAGCGAGCCGAGTCATGCGCAATCGCCCACACC
Internal bar code:TAACACATATGCCATGTCCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:71
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGTTGTAGAGCACCAGG
Suggested primer 2:CACATGAACCCTTCCCCCTC