Insertion junction: CLIP2.042421_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042421
Chromosome:chromosome 6
Location:454563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g252100 (1 of 1) PTHR12389:SF0 - E3 UBIQUITIN-PROTEIN LIGASE LISTERIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAGCGATTGTTGGGGAAGGTTAATGGATCCCGGCTCGTCTTTATCCC
Internal bar code:AAACTTCGTCATAGGATTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2388
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAGCCAACATGCACGAC
Suggested primer 2:CAGGGGTTGCTTTTGTGTCG