Insertion junction: CLIP2.042424_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042424
Chromosome:chromosome 5
Location:3171250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232000 (1 of 1) IPR001623//IPR011989 - DnaJ domain // Armadillo-like helical intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGAAAAGGTACAGCACAGGCACGTGCACGTGAGCGTGAGCGTGAACG
Internal bar code:CGTGTAGGGTTATAAGCAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1474
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCTCTTCACGTCGGTCC
Suggested primer 2:AGGGGAGGAACACATGCATG