Insertion junction: CLIP2.042436_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042436
Chromosome:chromosome 16
Location:729965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691050 (1 of 1) PF08381 - Transcription factor regulating root and shoot growth via Pin3 (BRX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGCAGGGGTTGTTACGGCAGTACTCCGTCAGCACTCTGGAGTGGTG
Internal bar code:AAGCGGGACTCAAGGTTCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCTGAAAGGAAGGGAGG
Suggested primer 2:ACTCGTACTTCCAGGGCTCT