Insertion junction: CLIP2.042438_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042438
Chromosome:chromosome 14
Location:928590
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g613400 POC16 Proteome of centriole protein 16; (1 of 1) PTHR13720//PTHR13720:SF27 - WD-40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGTCGCACGTTCTGTTGCTTGCCGGCCCCGCAGCTCAAGGTGACGCC
Internal bar code:ACTGTACATTTAGGTGTTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGATGATGGTGGTGGTG
Suggested primer 2:CATGACGACGAATCAACCGC