Insertion junction: CLIP2.042441_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042441
Chromosome:chromosome 3
Location:8762464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207713 ISA3 Isoamylase, starch debranching enzyme 3; (1 of 2) 3.2.1.68 - Isoamylase / Debranching enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGGGTGACGGAGTACCACGTGGACGGCTTCCGCTTCGACCTGGCCAG
Internal bar code:CGGCAGGACTGGGAACAGGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCTTTGCAAACCGACC
Suggested primer 2:CTACATGATCGACCCCAGCC