Insertion junction: CLIP2.042444_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042444
Chromosome:chromosome 10
Location:5643667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458900 SRR33 (1 of 39) IPR001190 - SRCR domain; Scavenger receptor cysteine rich (SRCR) protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCTTGAAGTCCCGAGCCTCCACATCTGTTGATTTCAAGAGCATATGC
Internal bar code:TTGGCCGATTTCGGAGTCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2270
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CACATAATCCGCGTCCCGTA
Suggested primer 2:CCCTGTTGCCCATGTATGGT