Insertion junction: CLIP2.042447_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042447
Chromosome:chromosome 1
Location:1333576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800023 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGACCGGCTGTCTCTCTGTCTGTTGGGTAGCTTTGGCAGCAGGTAGC
Internal bar code:TGGCATTGGCGCAGGTTAATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTTGACCAAGCAACACG
Suggested primer 2:GCTTCGCCAATACCTGCATG