Insertion junction: CLIP2.042461_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042461
Chromosome:chromosome 3
Location:5377568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183451 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGTGAAAACTGCGTTGCGCAATACCTTCAGACAGCCGAACGGGCCA
Internal bar code:CGGGCCCTATATAGGTTCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2504
LEAP-Seq percent confirming:75.6098
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTTCTCCCTTCCGAAA
Suggested primer 2:CTGTGGTGTTGCATGTGTGG