Insertion junction: CLIP2.042465_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042465
Chromosome:chromosome 3
Location:8615265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTCCACCCGCGGCCTTCTACGTCGCGTCTTCGGCGCGACACGGTCTG
Internal bar code:ACTTTACTATGATGGGAGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3202
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGTGATGACCATTCCC
Suggested primer 2:CGCGGCCATAAGAAACTTCG