Insertion junction: CLIP2.042489_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042489
Chromosome:chromosome 13
Location:132208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562800 FAP337 (1 of 1) PTHR22844//PTHR22844:SF191 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED; WD40-repeat Flagellar Associated Protein 337 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGACAAAGCGAGGGCACCGGACACACCAGCAAATCACGCGCTCCCCAA
Internal bar code:TCACTTTATAAGGAGGCGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:89
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCGAAAGAGGAGTGGTG
Suggested primer 2:ATCCAGCTGCTGTTGATGCT