Insertion junction: CLIP2.042493_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042493
Chromosome:chromosome 3
Location:3126740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164600 PMA3,PMH1,ACA3 (1 of 3) K01535 - H+-transporting ATPase (E3.6.3.6); P-type ATPase/cation transporter, plasma membrane CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGGTAGAGCTGTGGGGCGCAGGCAAGGATGGGCCAAGGCGGTGGA
Internal bar code:ATGTCGTCTACAACTCCATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3255
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGCCCCACCTGTATGTG
Suggested primer 2:AACTGCACACGATAAGGCCA