Insertion junction: CLIP2.042498_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042498
Chromosome:chromosome 7
Location:6348179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357157 (1 of 1) 1.14.13.99 - 24-hydroxycholesterol 7-alpha-hydroxylase / 24-hydroxycholesterol 7-alpha-monooxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGAAGCAGCGGGCTACCGCTATTGCCTATGCGTAGCTATATACGCTGC
Internal bar code:AAGCACGGTCGTACTAAACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:739
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGCAATGAGGGTGAGCG
Suggested primer 2:TGTGTGTGTGGCTTCCCTAC