Insertion junction: CLIP2.042500_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042500
Chromosome:chromosome 12
Location:3075926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501200 SKP1,ROC80 E3 ubiquitin ligase; (1 of 1) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCTCGCATGGCCCTTAGAGCCGCGCCCCCATCGGCCATGGCTATGCA
Internal bar code:TGTATGGGAGGAGAATACAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAAGCCCACTGGTTCTC
Suggested primer 2:ACACAAATCGCAACCATGGC