Insertion junction: CLIP2.042505_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042505
Chromosome:chromosome 10
Location:3946121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446850 (1 of 10) PF02373 - JmjC domain, hydroxylase (JmjC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATGCATGCAGCATGCAGCGAGCAGGCAGTTCGCGGCTGCCACGCTGC
Internal bar code:GTAGTTTTCCTAATAGATATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTAAGGACTTCCCGCC
Suggested primer 2:CCTCCACCTCGTTATACGCC