Insertion junction: CLIP2.042509_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042509
Chromosome:chromosome 12
Location:5978891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534100 COL,CON2 (1 of 3) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED; CONSTANS-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTCGTCCGACACGCGTGTCCGTTGCGTTGGCGGTGACAGATGGCCCC
Internal bar code:ATAGTGGGGCCGGCATGGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4486
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACGAGCTGAGTTTGGT
Suggested primer 2:CGAGAATTTACGCGCTTGGG